Creamer Lab Publications

[In reverse chronological order]

Peer-Reviewed Papers

    TPC as Principal Investigator:

  1. B. Stevenson, H.A. Choy, M. Pinne, M.L. Rotondi, M.C. Miller, E. Demoll, P. Kraiczy, A.E. Cooley,
    T.P. Creamer, M.A. Suchard, C.A. Brissette, A. Verma and D.A. Haake (2007) PLoS ONE 2:e1188.
    (Evidence for polyproline II helical structure in short polyglutamine tracts.)

  2. B.W. Chellgren, A.-F. Miller and T.P. Creamer (2006) Journal of Molecular Biology 361:362-371.
    (Evidence for polyproline II helical structure in short polyglutamine tracts.)

  3. T.P. Creamer and J.S. Fetrow (2006) Proteins 63:268-272.
    (Rose is a rose is a rose. Especially if you're a George.)

  4. D.G. Barrett, C.M. Minder, M.U. Mian, S.J. Whittington, W.J. Cooper, A. Tripathy, M.L. Waters,
    T.P. Creamer and G.J. Pielak (2006) Proteins 63:322-326.
    (Pressure perturbation calorimetry of alpha helical and polyproline II helical peptides.)

  5. B.W. Chellgren and T.P. Creamer (2006) Proteins 62:411-420.
    (Side-chain entropy effects on protein secondary structure formation.)

  6. A. Bhattacharyya, A.K. Thakur, V.M. Chellgren, G. Thiagarajan, A.D. Williams, B.W. Chellgren,
    T.P. Creamer and R. Wetzel (2006) Journal of Molecular Biology 355:524-535.
    (Oligoproline effects on polyglutamine conformation and aggregation.)

  7. S.J. Whittington, B.W. Chellgren, V.M. Hermann and T.P. Creamer (2005) Biochemistry 44:6269-6275.
    (Urea promotes polyproline II helix formation: implications for protein denatured states.)

  8. B.W. Chellgren and T.P. Creamer (2004) Journal of the American Chemical Society 126:14734-14735.
    (Effects of H2O and D2O on the polyproline II helical structure.)

  9. B.W. Chellgren and T.P. Creamer (2004) Biochemistry 43:5864-5869.
    (Short sequences of non-proline residues can adopt the polyproline II helical conformation.)

  10. K.L. Sim and T.P. Creamer (2004) Proteins 54:629-638.
    (Protein simple sequence conservation.)

  11. S.J. Whittington and T.P. Creamer (2003) Biochemistry 42:14690-14695.
    (Salt bridges do not stabilize polyproline II helices.)

  12. A.L. Rucker, C.T. Pager, M.N. Campbell, J.E. Qualls and T.P. Creamer (2003) Proteins 53:68-75.
    (Host-guest scale of left-handed polyproline II helix formation.)

  13. K.L. Sim and T.P. Creamer (2002) Molecular & Cellular Proteomics 1:983-995.
    (Abundance and distributions of eukaryote protein simple sequences.)

  14. A.L. Rucker and T.P. Creamer (2002) Protein Science 11:980-985.
    (Polyproline II helices in protein denatured states: Lysine peptides revisited.)

  15. M.A. Kelly, B.W. Chellgren, A.L. Rucker, J.M. Troutman, M.G. Fried, A.-F. Miller and T.P. Creamer
    (2001) Biochemistry 40:14376-14383.
    (Host-guest study of left-handed polyproline II helix formation.)

  16. T.P. Creamer (2000) Proteins 40:443-450.
    (Side chain conformational entropy in protein unfolded states.)

  17. B.J. Stapley and T.P. Creamer (1999) Protein Science 8:587-595.
    (A survey of left-handed polyproline II helices.)

  18. T.P. Creamer (1998) Proteins 33:218-226.
    (Left-handed polyproline II helix formation is (very) locally driven.)

    TPC as a Research Associate/Postdoctoral Fellow:

  19. T.P. Creamer, R. Srinivasan and G.D. Rose (1997) Biochemistry 36:2832-2835.
    (Modeling unfolded states of proteins and peptides. II. Backbone solvent accessibility.)

  20. R. Aurora, T.P. Creamer, R. Srinivasan and G.D. Rose (1997) J. Biol. Chem. 272:1413-1416.
    (Local interactions in protein folding: Lessons from the alpha-helix. )

  21. R. Aurora, T.P. Creamer and E.E. Lattman (1996) Proteins 25: i-iv.
    (The Editor's Corner: 1996 Johns Hopkins Protein Folding Meeting. )

  22. W.C. Wimley, T.P. Creamer and S.H. White (1996) Biochemistry 35: 5109-5124.
    (Solvation energies of amino acid side chains and backbone in a family of host-guest pentapeptides.)

  23. W.C. Wimley, K. Gawrisch, T.P. Creamer and S.H. White (1996) Proc. Natl. Acad. Sci., USA 93: 2985-2990.
    (A direct measurement of salt-bridge solvation energies: Implications for protein stability.)

  24. T.P. Creamer, R. Srinivasan and G.D. Rose (1995) Biochemistry 34: 16245-16250.
    (Modeling unfolded states of peptides and proteins.)

  25. T.P. Creamer and G.D. Rose (1995) Protein Science 4: 1305-1314.
    (Interactions between hydrophobic side chains within alpha-helices. )

  26. T.P. Creamer and G.D. Rose (1994) Proteins 19: 85-97.
    (alpha-Helix-forming propensities in peptides and proteins.)

  27. G.D. Rose and T.P. Creamer (1994) Proteins 19: 1-3.
    (Protein folding: Predicting predicting.)

  28. T.P. Creamer and G.D. Rose (1992) Proc. Natl. Acad. Sci., USA 89: 5937-5941.
    (Side chain entropy opposes alpha-helix formation but rationalizes experimentally-determined
    helix-forming propensities.    )

    TPC as a Graduate Student:

  29. G.A. Christos, S.L. Carnie and T.P. Creamer (1992) Macromolecules 25: 1121-1124.
    (Monte Carlo simulations of partially-ionized polyelectrolytes: Conformational properties.)

  30. S.L. Carnie, G.A. Christos and T.P. Creamer (1988) J. Chem. Phys. 89: 6484-6496.
    (Monte Carlo simulations of polyelectrolytes: Isolated, fully ionized chains with screened
    Coulomb interactions.    )

Book Chapters

  1. V.M. Chellgren, B.W. Chellgren and T.P. Creamer, "Studies of protein disordered states using peptide
    model systems", in
    Unfolded Proteins: From Denatured to Intrinisically Disordered,
    Editor T.P. Creamer, Nova Science Publshers, NY (2008).

  2. T.P. Creamer and M.N. Campbell, "Determinants of the polyproline II helix from modeling studies", in
    Advances in Protein Chemistry, Editor G.D. Rose, 62: 263-282 (2002).

  3. T.P. Creamer, "Conformational entropy in protein folding", in Protein Folding and Stability, 2nd Edition,
    Methods in Molecular Biology, Editor K.P. Murphy, The Humana Press, Totowa, NJ, p.117-132 (2001).

  4. T.P. Creamer and G.D. Rose, "Simple force field for study of peptide and protein conformational properties", in
    Methods in Enzymology, Editors M.L. Johnson and G.L. Ackers, 259: 576-589 (1995).

  5. T.P. Creamer, R. Srinivasan and G.D. Rose, "Evaluation of interactions between residues in alpha-helices
    by exhaustive conformational search", in
    Techniques in Protein Chemistry VI, Editor J.W. Crabb, Academic Press, San Diego, p.443-450 (1995).

Books

  1. Unfolded Proteins: From Denatured to Intrinisically Disordered,
    Editor T.P. Creamer, Nova Science Publshers, NY (2008).

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